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Healthy Whole Wheat Blueberry Muffins

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5 from 7 votes
Christie MatherneBy Christie Matherne
Christie Matherne
Christie Matherne Food Editor

Christie is a curious lifelong writer and passionate home chef with a scientific approach to cooking. She specializes in Cajun food, but will cook just about anything, especially if it takes all day.

Expertise: Traditional Cajun Foods, Indian, Italian, Tex-Mex & Mexican Cuisines View all posts →
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Craving a healthy breakfast, but can’t find the time? Meal prep these Healthy Whole Wheat Blueberry Muffins and you’re ready to greet the day!

close up of whole wheat blueberry muffins with a bite taken out of one

Muffins are my favorite winter breakfast. Why winter? I don’t know. Maybe I like the extra dose of self-care that a muffin imparts on me. Maybe it’s because the oven warms up the house, and I enjoy smelling sweet baked goods when it’s cold outside. I’m sure the reason exists, but I’m not precisely sure what it is. I’m okay with that.

Muffins come in all textures and flavors, and I’ve had some not-so-great muffins in my life. So now, when I make my own muffins, I take my time with it. I give them everything they need to be great muffins—including buttermilk, gentle stirring, and a long chill in the fridge before baking.

With their moist, tender crumb and juicy pops of sweet blueberries, these muffins could be the best muffins I’ve ever made. It’s hard to see a batch of blueberry muffins as a great achievement, but once you’ve made these, you’ll understand why.

Making a healthy blueberry muffin recipe

Why use buttermilk in muffins?

Let me tell you why you don’t want to skip the buttermilk in this recipe. The acid in buttermilk helps break down long strands of gluten in baked goods, which means you’ll end up with a more tender, fluffy muffin. Buttermilk also reacts with leavening agents like baking soda, so when you let the muffin batter sit in the fridge for an hour, the buttermilk has more time to react, meaning your muffins will be airy and rise higher in the oven. This is why your muffins will come out with puffy domed tops!

Close up of whole grain blueberry muffins in a muffin pan

How do I store leftovers?

Store leftover muffins in a sealed container at room temperature for up to 3 days, or in the fridge for up to 5 days. You can freeze these muffins (double-wrapped in plastic) in a freezer-safe container or bag for up to 3 months. Pull them out of the freezer and let them thaw in the fridge overnight before reheating or eating at room temperature!

whole wheat blueberry muffins cut in half with a hand holding it

Serving suggestions

Serve these beautiful muffins with your favorite cup of coffee. I like them with my Iced Coffee. You can also make some Greek Yogurt Frosting to put on top for more of a dessert-like bite. They’re perfect with a side of Healthy Strawberry Chia Jam, too!

whole wheat blueberry muffins on a plate with a hand grabbing one

Recipe

Healthy Whole Wheat Blueberry Muffins

5 from 7 votes
Print Rate
Serves: 12 Muffins
Prep: 20 minutes minutes
Cook: 20 minutes minutes
Resting Time: 1 hour hour
Total: 1 hour hour 40 minutes minutes

Ingredients

  • 1¾ cup + ½ teaspoon white whole wheat flour divided
  • 1 tablespoon baking powder
  • ½ teaspoon sea salt
  • ¾ cup coconut sugar
  • ½ cup + 2 tablespoons Bulgarian-style buttermilk
  • ½ cup full-fat plain Greek yogurt
  • ¼ cup coconut oil melted, at room temperature
  • 1 egg room temperature
  • 1 egg yolk room temperature
  • 2 teaspoons vanilla extract
  • 1 cup fresh blueberries
  • 1 tablespoon raw organic cane sugar

Instructions

  • In a medium bowl, stir together 1¾ cup white whole wheat flour, baking powder, and salt. Set aside.
  • In a separate large bowl, stir all the remaining ingredients together, except for the blueberries, ½ teaspoon flour, and cane sugar.
  • Add in the flour mixture and gently whisk until flour is just moistened, about 8-12 stirs. You will see a few flour streaks and many small lumps.
  • In a small bowl, mix together the remaining ½ teaspoon of flour with the blueberries. Fold them into the batter gently, being careful not to overmix.
  • Cover and refrigerate for 1 hour. This step helps the muffins bake with domed tops.
  • Once the dough is chilled, preheat your oven to 450℉ and generously spray a muffin pan with cooking spray.
  • Use a large ice cream scoop and scoop the batter into the muffin tins. Each tin should be most of the way full. Sprinkle the tops with the cane sugar.
    Making a healthy blueberry muffin recipe
  • Bake for 5 minutes. Then, turn down the heat to 375℉ and bake another 15-16 minutes until the outside is golden brown and a toothpick inserted in the center comes out clean.
  • Once muffins are baked, let them cool in the pan for 10 minutes. Then, transfer to a cooling rack to cool completely before serving.
    A whole wheat blueberry muffins recipe on a plate

Nutrition Info:

Calories: 222kcal (11%) Carbohydrates: 37g (12%) Protein: 7g (14%) Fat: 6g (9%) Saturated Fat: 4g (25%) Sodium: 139mg (6%) Fiber: 4g (17%) Sugar: 10g (11%)

Nutrition Disclaimer

Nutrition information are estimates only and may vary based on the specific brands, ingredients, and portion sizes you use. This data is provided for informational purposes only.

Author: Christie Matherne
Course:Breakfast
Cuisine:American
Share your creationsTag @foodfaithfit and hashtag it #foodfaithfitness so I can see what you made!
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Bright smiling woman outdoors, promoting healthy living, fitness, and nutritious food lifestyle, representing Food Faith Fitness community.

About Christie MatherneTraditional Cajun Foods, Indian, Italian, Tex-Mex & Mexican Cuisines

Christie is a curious lifelong writer and passionate home chef with a scientific approach to cooking. She specializes in Cajun food, but will cook just about anything, especially if it takes all day.

Reader Interactions

Paola Westbeek

✓Reviewed by Paola WestbeekGastronomy & Fine Wines

Published: Jul 17, 2019 | Updated: Apr 2, 2026
5 from 7 votes (7 ratings without comment)

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Have a question? Use the form below to submit your question or comment. I love hearing from you and seeing what you made!

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  1. Avatar photoMinerva Moser says

    Posted on 8/24 at 7:42 pm

    That’s a big load of weird-ass, hard-to-find ingredients! I looked around online and NO grocery stores near me carry full fat (“Bulgarian”) buttermilk.

    Reply
    • Avatar photoFoodfaithfitness says

      Posted on 8/30 at 8:37 am

      Hi Minnie, you should be able to find it on Amazon: https://amzn.to/3Q3afR0
      Hope you managed to try the recipe, it tastes great!

      Reply
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